filtering trace tables by spot intensity

copies localization files

Use a generic path (with *) to give a set of files:

localization_cp_files --files /user/DATA/exp_7/*/localizations.dat --destination_folder .

Note

You can check your generic path with: ls /user/DATA/exp_7/*/localizations.dat

merges localization files

ls *.dat | localization_merge

filters repeated spots while keeping only the one with highest intensity

trace_filter --input merged_traces.ecsv --clean_spots --localization_file merged_localizations.ecsv

Compare results

Removing all repeated barcodes

Keeping only spot with highest intensity