Plotting interactions from a trace table
4M plots
To make 4M plots for a cutoff distance of 0.20 microns, for anchor 18 using 10 bootstrapping cycles:
plot_4m --input merged_traces_filtered.ecsv --anchor 18 --cutoff 0.20 --bootstrapping_cycles 10 --output coloc_plot.png
Result:
3-way interactions
To plot the 3-way interactions for a cutoff distance of 0.20 microns, for anchor 25 using 2 bootstrapping cycles:
trace_3way_coloc --input merged_traces_filtered.ecsv --cutoff 0.20 --bootstrapping_cycles 2 --anchor 25
The results look like this: